Tags

• test 1
• test2 1
• bioinformatics 6
• pipelines 1
• pacbio 1
• hgap 1
• hgap3 1
• genome assembly 1
• academic 2
• research flaws 2
• research budget 2
• academia 1
• data 1
• data visualization 1
• microbiome 1
• otu 1
• otu table 1
• rarefaction 1
• pipeline 2
• rRNA 1
• rRNA gene 1
• 16S 1
• amplicons 1
• Ubuntu 1
• R 1
• R-3.4.0 1
• RStudio 1
• Microbial Ecology 3
• Metagenomics 3
• Metatranscriptomics 3
• Bioinformatics 3
• Microbiome 2
• Data mining 1
• AmpliconTagger 1
• high performance computing 3
• metagenomics 3
• 16S rRNA amplicons 1
• D3 1
• D3.js 1
• stacked barcharts 1
• stacked barplots 1
• taxonomic profiles 1
• Shotgun metagenomics 2
• Shallow sequencing 1
• Nextflow 1

test

• This is a test.

test2

• This is a test.

bioinformatics

• ShotgunMG pipeline now available as a Nextflow pipeline.
• Shallow shotgun metagenomics, shallow sequencing, sequencing depth
• AmpliconTagger pipeline, 16S 18S ITS rRNA amplicons. Marker gene pipeline
• Hpcs 2015 talk
• 16s rrna tag paper
• Pacbio hgap3 pipeline

pipelines

• Pacbio hgap3 pipeline

pacbio

• Pacbio hgap3 pipeline

hgap

• Pacbio hgap3 pipeline

hgap3

• Pacbio hgap3 pipeline

genome assembly

• Pacbio hgap3 pipeline

academic

• Academic flaws 2
• Academic flaws 1

research flaws

• Academic flaws 2
• Academic flaws 1

research budget

• Academic flaws 2
• Academic flaws 1

academia

• Academic flaws 2

data

• Data visualization 1

data visualization

• Data visualization 1

microbiome

• Rarefy otu tables

otu

• Rarefy otu tables

otu table

• Rarefy otu tables

rarefaction

• Rarefy otu tables

pipeline

• Hpcs 2015 talk
• 16s rrna tag paper

rRNA

• 16s rrna tag paper

rRNA gene

• 16s rrna tag paper

16S

• 16s rrna tag paper

amplicons

• 16s rrna tag paper

Ubuntu

• Install r 3.4.0 and rstudio on ubuntu 16.04

R

• Install r 3.4.0 and rstudio on ubuntu 16.04

R-3.4.0

• Install r 3.4.0 and rstudio on ubuntu 16.04

RStudio

• Install r 3.4.0 and rstudio on ubuntu 16.04

Microbial Ecology

• Our latest oil degradation by microbial communities study is out in environmental microbiology
• New book chapter written by myself and charles greer is out now in comprehensive biotechnology 3rd edition
• Our oil degradation paper is out in isme j

Metagenomics

• Our latest oil degradation by microbial communities study is out in environmental microbiology
• New book chapter written by myself and charles greer is out now in comprehensive biotechnology 3rd edition
• Our oil degradation paper is out in isme j

Metatranscriptomics

• Our latest oil degradation by microbial communities study is out in environmental microbiology
• New book chapter written by myself and charles greer is out now in comprehensive biotechnology 3rd edition
• Our oil degradation paper is out in isme j

Bioinformatics

• Our latest oil degradation by microbial communities study is out in environmental microbiology
• New book chapter written by myself and charles greer is out now in comprehensive biotechnology 3rd edition
• Our oil degradation paper is out in isme j

Microbiome

• Our latest oil degradation by microbial communities study is out in environmental microbiology
• New book chapter written by myself and charles greer is out now in comprehensive biotechnology 3rd edition

Data mining

• New book chapter written by myself and charles greer is out now in comprehensive biotechnology 3rd edition

AmpliconTagger

• AmpliconTagger pipeline, 16S 18S ITS rRNA amplicons. Marker gene pipeline

high performance computing

• ShotgunMG pipeline now available as a Nextflow pipeline.
• Shallow shotgun metagenomics, shallow sequencing, sequencing depth
• AmpliconTagger pipeline, 16S 18S ITS rRNA amplicons. Marker gene pipeline

metagenomics

• ShotgunMG pipeline now available as a Nextflow pipeline.
• Shallow shotgun metagenomics, shallow sequencing, sequencing depth
• AmpliconTagger pipeline, 16S 18S ITS rRNA amplicons. Marker gene pipeline

16S rRNA amplicons

• AmpliconTagger pipeline, 16S 18S ITS rRNA amplicons. Marker gene pipeline

D3

• Interactive sortable stacked bar plot in D3.js

D3.js

• Interactive sortable stacked bar plot in D3.js

stacked barcharts

• Interactive sortable stacked bar plot in D3.js

stacked barplots

• Interactive sortable stacked bar plot in D3.js

taxonomic profiles

• Interactive sortable stacked bar plot in D3.js

Shotgun metagenomics

• ShotgunMG pipeline now available as a Nextflow pipeline.
• Shallow shotgun metagenomics, shallow sequencing, sequencing depth

Shallow sequencing

• Shallow shotgun metagenomics, shallow sequencing, sequencing depth

Nextflow

• ShotgunMG pipeline now available as a Nextflow pipeline.